Pseudomonas syringae pv. syringae B728a, Psyr_3959

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_3959
Name
Replicon chromosome
Genomic location 4707097 - 4708713 (+ strand)

Cross-References

RefSeq YP_237027.1
GI 66047186
EC Number 1.4.3.16
Entrez 3369494
INSDC AAY38989.1
NCBI Locus Tag Psyr_3959
UniParc UPI0000395CC0
UniProtKB Acc Q4ZPD3
UniProtKB ID Q4ZPD3_PSEU2
UniRef100 UniRef100_Q4ZPD3
UniRef50 UniRef50_P10902
UniRef90 UniRef90_D7I4M4

Product

Feature Type CDS
Coding Frame 1
Product Name
L-aspartate oxidase
Synonyms
Evidence for Translation
Charge (pH 7) -17.98
Kyte-Doolittle Hydrophobicity Value -0.217
Molecular Weight (kDa) 59.9
Isoelectric Point (pI) 5.43

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 608 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000735 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_3959

Human Homologs

Ensembl 110, assembly GRCh38.p14
succinate dehydrogenase complex flavoprotein subunit A [Source:HGNC Symbol;Acc:HGNC:10680]
E-value: 4.1e-60
Percent Identity: 32.3

References

No references are associated with this feature.