Strain |
Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest |
Locus Tag |
Psyr_4008
|
Name |
|
Replicon | chromosome |
Genomic location | 4772247 - 4775381 (+ strand) |
RefSeq | YP_237076.1 |
GI | 66047235 |
Entrez | 3369544 |
INSDC | AAY39038.1 |
NCBI Locus Tag | Psyr_4008 |
UniParc | UPI000050DA91 |
UniProtKB Acc | Q4ZP84 |
UniProtKB ID | Q4ZP84_PSEU2 |
UniRef100 | UniRef100_Q4ZP84 |
UniRef50 | UniRef50_P24177 |
UniRef90 | UniRef90_Q48EP3 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
hydrophobe/amphiphile efflux-1 HAE1
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -6.92 |
Kyte-Doolittle Hydrophobicity Value | 0.290 |
Molecular Weight (kDa) | 112.4 |
Isoelectric Point (pI) | 5.78 |
Individual Mappings | |
Additional evidence for subcellular localization |
Identified using the Resistance Gene Identifier (RGI)
Model Name | Definition | Accession | Model Type (?) | SNP | Cutoff | Bit Score | Percent Identity | CARD Version |
adeF | AdeF is the membrane fusion protein of the multidrug efflux complex AdeFGH. [PMID:20696879] | ARO:3000777 | protein homolog model | Strict | 760.0 | 42.22 | 3.2.5 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 487 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000417 (2093 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: Psyr_4008
Search term: hydrophobe/amphiphile efflux-1 HAE1
|