Pseudomonas syringae pv. syringae B728a, Psyr_4971

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_4971
Name
Replicon chromosome
Genomic location 5895050 - 5896006 (+ strand)

Cross-References

RefSeq YP_238036.1
GI 66048195
Entrez 3370523
INSDC AAY39998.1
NCBI Locus Tag Psyr_4971
UniParc UPI000050DBA7
UniProtKB Acc Q4ZLH4
UniProtKB ID Q4ZLH4_PSEU2
UniRef100 UniRef100_Q4ZLH4
UniRef50 UniRef50_Q4ZLH4
UniRef90 UniRef90_Q4ZLH4

Product

Feature Type CDS
Coding Frame 1
Product Name
Sel1 repeat-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) -2.38
Kyte-Doolittle Hydrophobicity Value -0.725
Molecular Weight (kDa) 35967.0
Isoelectric Point (pI) 6.41

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 37 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG019655 (13 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_4971

Human Homologs

References

No references are associated with this feature.