Pseudomonas syringae pv. syringae B728a, Psyr_4986

Gene Feature Overview

Strain	Pseudomonas syringae pv. syringae B728a (Feil et al., 2005) GCF_000012245.1|latest
Locus Tag	Psyr_4986
Name
Replicon	chromosome
Genomic location	5911246 - 5915475 (+ strand)

Cross-References

RefSeq	YP_238051.1
GI	66048210
Entrez	3370538
INSDC	AAY40013.1
NCBI Locus Tag	Psyr_4986
UniParc	UPI000050DBB0
UniProtKB Acc	Q4ZLF9
UniProtKB ID	Q4ZLF9_PSEU2
UniRef100	UniRef100_Q4ZLF9
UniRef50	UniRef50_I7CEU0
UniRef90	UniRef90_Q4ZLF9

Product

Feature Type	CDS
Coding Frame	1
Product Name	YD repeat-containing protein
Synonyms
Evidence for Translation
Charge (pH 7)	-18.44
Kyte-Doolittle Hydrophobicity Value	-0.534
Molecular Weight (kDa)	158296.9
Isoelectric Point (pI)	6.33

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 207 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000092 (1670 members)
Putative Inparalogs	3 predicted inparalogs RHS protein (Psyr_4995) 85.6% identity YD repeat-containing protein (Psyr_4990) 81.5% identity YD repeat-containing protein (Psyr_4988) 95.6% identity

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: Psyr_4986 Search term: YD repeat-containing protein

Human Homologs

References