Pseudomonas syringae pv. syringae B728a, Psyr_5056

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_5056
Name
Replicon chromosome
Genomic location 5998600 - 6000162 (- strand)

Cross-References

RefSeq YP_238121.1
GI 66048280
Entrez 3370614
INSDC AAY40083.1
NCBI Locus Tag Psyr_5056
UniParc UPI0000394E80
UniProtKB Acc Q4ZL89
UniProtKB ID Q4ZL89_PSEU2
UniRef100 UniRef100_Q4ZL89
UniRef50 UniRef50_Q4K3H7
UniRef90 UniRef90_Q4ZL89

Product

Feature Type CDS
Coding Frame 1
Product Name
regulatory protein, GntR
Synonyms
Evidence for Translation
Charge (pH 7) 5.40
Kyte-Doolittle Hydrophobicity Value -0.038
Molecular Weight (kDa) 56358.0
Isoelectric Point (pI) 8.09

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 552 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003722 (964 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_5056

Human Homologs

References

No references are associated with this feature.