Pseudomonas syringae pv. syringae B728a, Psyr_5064

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_5064
Name
Replicon chromosome
Genomic location 6007406 - 6008272 (- strand)

Cross-References

RefSeq YP_238129.1
GI 66048288
Entrez 3370622
INSDC AAY40091.1
NCBI Locus Tag Psyr_5064
UniParc UPI0000394E89
UniProtKB Acc Q4ZL81
UniProtKB ID Q4ZL81_PSEU2
UniRef100 UniRef100_Q4ZL81
UniRef50 UniRef50_C1DH57
UniRef90 UniRef90_Q4K3G5

Product

Feature Type CDS
Coding Frame 1
Product Name
helix-turn-helix protein RpiR:sugar isomerase (SIS)
Synonyms
Evidence for Translation
Charge (pH 7) 1.00
Kyte-Doolittle Hydrophobicity Value 0.176
Molecular Weight (kDa) 31.0
Isoelectric Point (pI) 7.19

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 223 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004989 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_5064

Human Homologs

References

No references are associated with this feature.