Pseudomonas syringae pv. syringae B728a, Psyr_5075
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest |
| Locus Tag |
Psyr_5075
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 6018554 - 6019762 (- strand) |
Cross-References
| RefSeq | YP_238140.1 |
| GI | 66048299 |
| Entrez | 3370633 |
| NCBI Locus Tag | Psyr_5075 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
cobalamin synthesis protein/P47K:cobalamin synthesis protein/P47K
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -26.15 |
| Kyte-Doolittle Hydrophobicity Value | -0.226 |
| Molecular Weight (kDa) | 45491.0 |
| Isoelectric Point (pI) | 4.33 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 364 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG005068 (531 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Psyr_5075
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
Zn regulated GTPase metalloprotein activator 1B [Source:HGNC Symbol;Acc:HGNC:17907]
E-value:
5.3e-28
Percent Identity:
31.1
|
References
No references are associated with this feature.