Pseudomonas aeruginosa UCBPP-PA14, PA14_01070 (tssF1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14
Locus Tag
PA14_01070
Name
tssF1
Replicon chromosome
Genomic location 103012 - 104871 (+ strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 6 transposon mutants in orthologs
CommentHcp Secretion Island-I-encoded type VI secretion system (H1-T6SS)

Cross-References

RefSeq YP_788245.1
GI 116053808
Entrez 4383506
INSDC ABJ15044.1
NCBI Locus Tag PA14_01070
UniParc UPI0000396C1D
UniProtKB Acc Q02UZ1
UniProtKB ID Q02UZ1_PSEAB
UniRef100 UniRef100_W0YKW9
UniRef50 UniRef50_G8MKX7
UniRef90 UniRef90_W0YKW9

Product

Feature Type CDS
Coding Frame 1
Product Name
TssF1
Product Name Confidence: Class 1
Synonyms hypothetical protein
Evidence for Translation
Charge (pH 7) 1.36
Kyte-Doolittle Hydrophobicity Value -0.296
Molecular Weight (kDa) 69.4
Isoelectric Point (pI) 7.21

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 104 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000087 (1252 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_01070
Search term: tssF1
Search term: TssF1

References

RsmA and AmrZ orchestrate the assembly of all three type VI secretion systems in Pseudomonas aeruginosa.
Allsopp LP, Wood TE, Howard SA, Maggiorelli F, Nolan LM, Wettstadt S, Filloux A.
Proc Natl Acad Sci U S A. 2017 Jul 18;114(29):7707-7712.
PubMed ID: 28673999