Pseudomonas aeruginosa UCBPP-PA14, PA14_05600

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_05600
Name
Replicon chromosome
Genomic location 496862 - 497416 (- strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq YP_788605.1
GI 116054162
Entrez 4384299
INSDC ABJ15398.1
NCBI Locus Tag PA14_05600
UniParc UPI0000E448C6
UniProtKB Acc Q02TY1
UniProtKB ID Q02TY1_PSEAB
UniRef100 UniRef100_Q02TY1
UniRef50 UniRef50_Q9I686
UniRef90 UniRef90_Q9I686

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.15
Kyte-Doolittle Hydrophobicity Value -0.451
Molecular Weight (kDa) 20.6
Isoelectric Point (pI) 6.96

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6Z3O HYDROLASE 05/21/20 The E74Q mutant of Small Alarmone Hydrolase SAH from Pseudomonas aeruginosa PAO1 Pseudomonas aeruginosa PAO1 1.74 X-RAY DIFFRACTION 98.4
6Z3N HYDROLASE 05/21/20 Apo Structure of a Hydrolase from Pseudomonas aeruginosa PAO1 Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) 1.58 X-RAY DIFFRACTION 98.9
6YVC HYDROLASE 04/28/20 Crystal structure of the small alarmone hydrolase (SAH) of Pseudomonas aeruginosa Pseudomonas aeruginosa 1.85 X-RAY DIFFRACTION 99.4

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 240 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000422 (313 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_05600

Human Homologs

Ensembl 110, assembly GRCh38.p14
HD domain containing 3 [Source:HGNC Symbol;Acc:HGNC:30522]
E-value: 1.8e-07
Percent Identity: 32.9
Ensembl 110, assembly GRCh38.p14
HD domain containing 3 [Source:HGNC Symbol;Acc:HGNC:30522]
E-value: 1.8e-07
Percent Identity: 32.9

References

No references are associated with this feature.