Pseudomonas aeruginosa UCBPP-PA14, PA14_07520 (rpoD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14
GCF_000014625.1|latest
Locus Tag
PA14_07520
Name
rpoD
Replicon chromosome
Genomic location 647191 - 649044 (- strand)

Cross-References

RefSeq YP_788749.1
GI 116054304
Entrez 4384223
INSDC ABJ15540.1
NCBI Locus Tag PA14_07520
UniParc UPI0000134834
UniProtKB Acc Q02TI7
UniProtKB ID Q02TI7_PSEAB
UniRef100 UniRef100_P26480
UniRef50 UniRef50_P26480
UniRef90 UniRef90_P26480

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA polymerase sigma factor RpoD
Synonyms
Evidence for Translation
Charge (pH 7) -31.01
Kyte-Doolittle Hydrophobicity Value -0.593
Molecular Weight (kDa) 69.6
Isoelectric Point (pI) 4.62

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 590 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000559 (552 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_07520
Search term: rpoD

References

No references are associated with this feature.