Pseudomonas aeruginosa UCBPP-PA14, PA14_08040

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_08040
Name
Replicon chromosome
Genomic location 690976 - 691509 (+ strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq YP_788792.1
GI 116054347
Entrez 4385495
INSDC ABJ15583.1
NCBI Locus Tag PA14_08040
UniParc UPI0000E448DD
UniProtKB Acc Q02TE4
UniProtKB ID Q02TE4_PSEAB
UniRef100 UniRef100_Z2DBD0
UniRef50 UniRef50_A0A0C6F553
UniRef90 UniRef90_W0YMB8

Product

Feature Type CDS
Coding Frame 1
Product Name
phage tail protein
Synonyms
Evidence for Translation
Charge (pH 7) -4.31
Kyte-Doolittle Hydrophobicity Value -0.339
Molecular Weight (kDa) 20.0
Isoelectric Point (pI) 5.09

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6U5K ANTIMICROBIAL PROTEIN 08/27/19 CryoEM Structure of Pyocin R2 - postcontracted - baseplate Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) 3.5 ELECTRON MICROSCOPY 99.4
6U5B ANTIMICROBIAL PROTEIN 08/27/19 CryoEM Structure of Pyocin R2 - precontracted - baseplate Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) 3.5 ELECTRON MICROSCOPY 99.4

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 71 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000602 (321 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_08040

Human Homologs

References

No references are associated with this feature.