Pseudomonas aeruginosa UCBPP-PA14, PA14_18780

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_18780
Name
Replicon chromosome
Genomic location 1615483 - 1618644 (+ strand)
Transposon Mutants 2 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 23 transposon mutants in orthologs

Cross-References

RefSeq YP_789643.1
GI 116051521
Entrez 4381487
INSDC ABJ12757.1
NCBI Locus Tag PA14_18780
UniParc UPI00003960D9
UniProtKB Acc Q02QZ3
UniProtKB ID Q02QZ3_PSEAB
UniRef100 UniRef100_S0HT33
UniRef50 UniRef50_Q8EBL9
UniRef90 UniRef90_Q9HY87

Product

Feature Type CDS
Coding Frame 1
Product Name
RND efflux transporter
Synonyms
Evidence for Translation
Charge (pH 7) -10.36
Kyte-Doolittle Hydrophobicity Value 0.466
Molecular Weight (kDa) 112.4
Isoelectric Point (pI) 5.20

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AMR gene predictions from CARD database

Identified using the Resistance Gene Identifier (RGI)

Model Name Definition Accession Model Type (?) SNP Cutoff Bit Score Percent Identity CARD Version
mexQ MexQ is the inner membrane transporter of the multidrug efflux pump MexPQ-OpmE. [PMID:16301811] ARO:3003699 protein homolog model Strict 1963.7 99.53 3.2.5

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 489 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000417 (2093 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_18780

Human Homologs

References

No references are associated with this feature.