Pseudomonas aeruginosa UCBPP-PA14, PA14_49880

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14
Locus Tag
PA14_49880
Name
Replicon chromosome
Genomic location 4434859 - 4435431 (+ strand)
Transposon Mutants 2 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq YP_792146.1
GI 116049052
Entrez 4380088
INSDC ABJ10288.1
NCBI Locus Tag PA14_49880
UniParc UPI0000E44B5C
UniProtKB Acc Q02IU0
UniProtKB ID Q02IU0_PSEAB
UniRef100 UniRef100_Q02IU0
UniRef50 UniRef50_W0YNF8
UniRef90 UniRef90_W0YNF8

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 3.77
Kyte-Doolittle Hydrophobicity Value 0.035
Molecular Weight (kDa) 20.6
Isoelectric Point (pI) 8.38

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5Y61 SIGNALING PROTEIN 08/10/17 YfiB-YfiR complexed with GMP PSEUDOMONAS AERUGINOSA 2.99 X-RAY DIFFRACTION 98.1
4ZHY TRANSCRIPTION/SIGNALING PROTEIN 04/27/15 Crystal structure of a bacterial signalling complex PSEUDOMONAS AERUGINOSA PAO1 1.969 X-RAY DIFFRACTION 98.4
4YNA TRANSCRIPTION 03/09/15 Oxidized YfiR PSEUDOMONAS AERUGINOSA PAO1 3.2 X-RAY DIFFRACTION 98.1
5EB2 TRANSCRIPTION 10/17/15 Trp-bound YfiR PSEUDOMONAS AERUGINOSA PAO1 2.709 X-RAY DIFFRACTION 98.1
4ZHU TRANSCRIPTION 04/27/15 Crystal structure of a bacterial repressor protein PSEUDOMONAS AERUGINOSA PAO1 2.3968 X-RAY DIFFRACTION 98.9
5EB3 TRANSCRIPTION 10/17/15 VB6-bound protein PSEUDOMONAS AERUGINOSA PAO1 2.4 X-RAY DIFFRACTION 98.1
5EB1 MEMBRANE PROTEIN/TRANSCRIPTION 10/17/15 the YfiB-YfiR complex PSEUDOMONAS AERUGINOSA PAO1 1.8 X-RAY DIFFRACTION 98.1
4YN7 TRANSCRIPTION 03/09/15 Non-oxidized YfiR PSEUDOMONAS AERUGINOSA PAO1 2.6 X-RAY DIFFRACTION 98.1
4XJY SIGNALING PROTEIN 01/09/15 Periplasmic repressor protein YfiR PSEUDOMONAS AERUGINOSA PAO1 1.8 X-RAY DIFFRACTION 98.7
5Y62 SIGNALING PROTEIN 08/10/17 YfiR complexed with GMP PSEUDOMONAS AERUGINOSA 3.0 X-RAY DIFFRACTION 98.1
4YN9 TRANSCRIPTION 03/09/15 YfiR mutant-C110S PSEUDOMONAS AERUGINOSA PAO1 2.45 X-RAY DIFFRACTION 97.5

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 39 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001081 (459 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_49880

References

No references are associated with this feature.