Pseudomonas aeruginosa UCBPP-PA14, PA14_52420 (rimO)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14
Locus Tag
PA14_52420
Name
rimO
Replicon chromosome
Genomic location 4651789 - 4653111 (+ strand)
Transposon Mutants 2 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq YP_792360.1
GI 116048839
Entrez 4383146
INSDC ABJ10075.1
NCBI Locus Tag PA14_52420
UniParc UPI000045D06B
UniProtKB Acc Q02I76
UniProtKB ID RIMO_PSEAB
UniRef100 UniRef100_Q02I76
UniRef50 UniRef50_A8AIT5
UniRef90 UniRef90_A6VA58

Product

Feature Type CDS
Coding Frame 1
Product Name
ribosomal protein S12 methylthiotransferase
Synonyms
Evidence for Translation
Charge (pH 7) -21.08
Kyte-Doolittle Hydrophobicity Value -0.161
Molecular Weight (kDa) 49.0
Isoelectric Point (pI) 4.61

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 640 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000882 (554 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_52420
Search term: rimO

Human Homologs

Ensembl 94, assembly GRCh38.p12
CDK5 regulatory subunit associated protein 1 [Source:HGNC Symbol;Acc:HGNC:15880]
E-value: 2.4e-30
Percent Identity: 25.6

References

No references are associated with this feature.