Pseudomonas aeruginosa UCBPP-PA14, PA14_52420 (rimO)

Gene Feature Overview

Strain	Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006) GCF_000014625.1|latest
Locus Tag	PA14_52420
Name	rimO
Replicon	chromosome
Genomic location	4651789 - 4653111 (+ strand)
Transposon Mutants	2 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs	2 transposon mutants in orthologs

Cross-References

RefSeq	YP_792360.1
GI	116048839
Entrez	4383146
INSDC	ABJ10075.1
NCBI Locus Tag	PA14_52420
UniParc	UPI000045D06B
UniProtKB Acc	Q02I76
UniProtKB ID	RIMO_PSEAB
UniRef100	UniRef100_Q02I76
UniRef50	UniRef50_A8AIT5
UniRef90	UniRef90_A6VA58

Product

Feature Type	CDS
Coding Frame	1
Product Name	ribosomal protein S12 methylthiotransferase
Synonyms
Evidence for Translation
Charge (pH 7)	-21.08
Kyte-Doolittle Hydrophobicity Value	-0.161
Molecular Weight (kDa)	49.0
Isoelectric Point (pI)	4.61

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 640 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000882 (537 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PA14_52420 Search term: rimO Search term: ribosomal protein S12 methylthiotransferase

Human Homologs

References