Pseudomonas aeruginosa UCBPP-PA14, PA14_71500 (soxA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_71500
Name
soxA
Replicon chromosome
Genomic location 6369948 - 6372965 (+ strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 5 transposon mutants in orthologs

Cross-References

RefSeq YP_793893.1
GI 116053566
Entrez 4380602
INSDC ABJ14802.1
NCBI Locus Tag PA14_71500
UniParc UPI00000C5FF5
UniProtKB Acc Q02DU3
UniProtKB ID Q02DU3_PSEAB
UniRef100 UniRef100_Q9HTE6
UniRef50 UniRef50_Q9HTE6
UniRef90 UniRef90_Q9HTE6

Product

Feature Type CDS
Coding Frame 1
Product Name
sarcosine oxidase alpha subunit
Synonyms
Evidence for Translation
Charge (pH 7) 4.76
Kyte-Doolittle Hydrophobicity Value -0.236
Molecular Weight (kDa) 109.4
Isoelectric Point (pI) 7.53

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 498 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004972 (512 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_71500
Search term: soxA

Human Homologs

Ensembl 110, assembly GRCh38.p14
dimethylglycine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:24475]
E-value: 1.0e-32
Percent Identity: 27.3

References

No references are associated with this feature.