Pseudomonas aeruginosa UCBPP-PA14, PA14_72200 (prfH)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_72200
Name
prfH
Replicon chromosome
Genomic location 6431866 - 6432480 (- strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq YP_793947.1
GI 116053620
Entrez 4385003
INSDC ABJ14856.1
NCBI Locus Tag PA14_72200
UniParc UPI000045D331
UniProtKB Acc Q02DN9
UniProtKB ID Q02DN9_PSEAB
UniRef100 UniRef100_S0HHS0
UniRef50 UniRef50_P28369
UniRef90 UniRef90_W0YZQ0

Product

Feature Type CDS
Coding Frame 1
Product Name
peptide chain release factor-like protein
Synonyms
Evidence for Translation
Charge (pH 7) 10.29
Kyte-Doolittle Hydrophobicity Value -0.207
Molecular Weight (kDa) 22.3
Isoelectric Point (pI) 10.86

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 576 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005012 (312 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_72200
Search term: prfH

Human Homologs

Ensembl 110, assembly GRCh38.p14
mitochondrial translation release factor 1 like [Source:HGNC Symbol;Acc:HGNC:21051]
E-value: 1.1e-08
Percent Identity: 51.7
Ensembl 110, assembly GRCh38.p14
mitochondrial translation release factor 1 [Source:HGNC Symbol;Acc:HGNC:7469]
E-value: 1.1e-08
Percent Identity: 47.5
Ensembl 110, assembly GRCh38.p14
mitochondrial translation release factor 1 like [Source:HGNC Symbol;Acc:HGNC:21051]
E-value: 1.1e-08
Percent Identity: 51.7
Ensembl 110, assembly GRCh38.p14
mitochondrial translation release factor 1 [Source:HGNC Symbol;Acc:HGNC:7469]
E-value: 1.1e-08
Percent Identity: 47.5

References

No references are associated with this feature.