Pseudomonas aeruginosa PA7, PSPA7_0004 (gyrB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_0004
Name
gyrB
Replicon chromosome
Genomic location 4274 - 6694 (+ strand)

Cross-References

RefSeq YP_001345400.1
GI 152984068
EC Number 5.99.1.3
Entrez 5358744
INSDC ABR81251.1
NCBI Locus Tag PSPA7_0004
UniParc UPI0000D72846
UniProtKB Acc A6UX65
UniProtKB ID A6UX65_PSEA7
UniRef100 UniRef100_A6UX65
UniRef50 UniRef50_P13364
UniRef90 UniRef90_Q9I7C2

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA gyrase subunit B
Synonyms
Evidence for Translation
Charge (pH 7) -14.76
Kyte-Doolittle Hydrophobicity Value -0.404
Molecular Weight (kDa) 90.2
Isoelectric Point (pI) 5.83

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 633 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000004 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_0004
Search term: gyrB

Human Homologs

Ensembl 110, assembly GRCh38.p14
DNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]
E-value: 7.9e-31
Percent Identity: 23.7

References

No references are associated with this feature.