Pseudomonas aeruginosa PA7, PSPA7_0018 (sun)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_0018
Name
sun
Replicon chromosome
Genomic location 18646 - 19950 (- strand)

Cross-References

RefSeq YP_001345414.1
GI 152985582
EC Number 2.1.1.-
Entrez 5357200
INSDC ABR82765.1
NCBI Locus Tag PSPA7_0018
UniParc UPI0000D72853
UniProtKB Acc A6UX79
UniProtKB ID A6UX79_PSEA7
UniRef100 UniRef100_A6UX79
UniRef50 UniRef50_Q9I7A9
UniRef90 UniRef90_Q9I7A9

Product

Feature Type CDS
Coding Frame 1
Product Name
ribosomal RNA small subunit methyltransferase B
Synonyms
Evidence for Translation
Charge (pH 7) 1.91
Kyte-Doolittle Hydrophobicity Value -0.170
Molecular Weight (kDa) 47146.6
Isoelectric Point (pI) 7.48

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 581 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000017 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_0018
Search term: sun

Human Homologs

Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 9.8e-28
Percent Identity: 29.3
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 9.8e-28
Percent Identity: 29.3
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 9.8e-28
Percent Identity: 29.3
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 9.8e-28
Percent Identity: 29.3
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 9.8e-28
Percent Identity: 29.3
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 9.8e-28
Percent Identity: 29.3

References

No references are associated with this feature.