Pseudomonas aeruginosa PA7, PSPA7_0025 (hemF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_0025
Name
hemF
Replicon chromosome
Genomic location 25614 - 26531 (+ strand)

Cross-References

RefSeq YP_001345421.1
GI 152983988
Entrez 5354213
NCBI Locus Tag PSPA7_0025

Product

Feature Type CDS
Coding Frame 1
Product Name
coproporphyrinogen III oxidase
Synonyms
Evidence for Translation
Charge (pH 7) -6.77
Kyte-Doolittle Hydrophobicity Value -0.497
Molecular Weight (kDa) 34.7
Isoelectric Point (pI) 5.81

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 279 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000024 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_0025
Search term: hemF

Human Homologs

Ensembl 110, assembly GRCh38.p14
coproporphyrinogen oxidase [Source:HGNC Symbol;Acc:HGNC:2321]
E-value: 1.2e-75
Percent Identity: 44.7

References

No references are associated with this feature.