Pseudomonas aeruginosa PA7, PSPA7_4060

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_4060
Name
Replicon chromosome
Genomic location 4196572 - 4197351 (- strand)

Cross-References

RefSeq YP_001349414.1
GI 152984432
Entrez 5356578
INSDC ABR81615.1
NCBI Locus Tag PSPA7_4060
UniParc UPI0000D72922
UniProtKB Acc A6V8M9
UniProtKB ID A6V8M9_PSEA7
UniRef100 UniRef100_A6V8M9
UniRef50 UniRef50_Q397A0
UniRef90 UniRef90_A6V8M9

Product

Feature Type CDS
Coding Frame 1
Product Name
short chain dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) 2.42
Kyte-Doolittle Hydrophobicity Value -0.238
Molecular Weight (kDa) 28.7
Isoelectric Point (pI) 8.48

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 646 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001266 (313 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_4060

Human Homologs

Ensembl 110, assembly GRCh38.p14
dehydrogenase/reductase 7 [Source:HGNC Symbol;Acc:HGNC:21524]
E-value: 1.3e-19
Percent Identity: 31.6
Ensembl 110, assembly GRCh38.p14
dehydrogenase/reductase 7 [Source:HGNC Symbol;Acc:HGNC:21524]
E-value: 1.3e-19
Percent Identity: 31.6
Ensembl 110, assembly GRCh38.p14
dehydrogenase/reductase 7 [Source:HGNC Symbol;Acc:HGNC:21524]
E-value: 1.3e-19
Percent Identity: 31.6

References

No references are associated with this feature.