Pseudomonas aeruginosa PA7, PSPA7_4213

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_4213
Name
Replicon chromosome
Genomic location 4352774 - 4353445 (- strand)

Cross-References

RefSeq YP_001349567.1
GI 152985768
Entrez 5356568
INSDC ABR82951.1
NCBI Locus Tag PSPA7_4213
UniParc UPI0000D72CF2
UniProtKB Acc A6V932
UniProtKB ID A6V932_PSEA7
UniRef100 UniRef100_A6V932
UniRef50 UniRef50_W0YM96
UniRef90 UniRef90_W0YM96

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 6.95
Kyte-Doolittle Hydrophobicity Value -0.613
Molecular Weight (kDa) 25.3
Isoelectric Point (pI) 10.02

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
1VAV LYASE 02/19/04 Crystal structure of alginate lyase PA1167 from Pseudomonas aeruginosa at 2.0 A resolution Pseudomonas aeruginosa 2 X-RAY DIFFRACTION 95.5

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 24 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001125 (777 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_4213

Human Homologs

References

No references are associated with this feature.