Pseudomonas aeruginosa PA7, PSPA7_4765

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_4765
Name
Replicon chromosome
Genomic location 4897794 - 4899077 (+ strand)

Cross-References

RefSeq YP_001350107.1
GI 152987133
Entrez 5358233
INSDC ABR84316.1
NCBI Locus Tag PSPA7_4765
UniParc UPI0000D7258E
UniProtKB Acc A6VAM2
UniProtKB ID A6VAM2_PSEA7
UniRef100 UniRef100_A6VAM2
UniRef50 UniRef50_W6QYC2
UniRef90 UniRef90_Q9I5H4

Product

Feature Type CDS
Coding Frame 1
Product Name
porin
Synonyms
Evidence for Translation
Charge (pH 7) 4.21
Kyte-Doolittle Hydrophobicity Value -0.456
Molecular Weight (kDa) 47025.2
Isoelectric Point (pI) 9.21

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3T20 MEMBRANE PROTEIN 07/22/11 Crystal structure of Pseudomonas aeruginosa OccK5 (OpdH) Pseudomonas aeruginosa 2.6 X-RAY DIFFRACTION 96.4
2Y0L TRANSPORT PROTEIN 12/03/10 Crystal Structure of Pseudomonas Aeruginosa OpdO PSEUDOMONAS AERUGINOSA 2.59 X-RAY DIFFRACTION 96.3

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 17 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000729 (839 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_4765
Search term: porin

Human Homologs

References

No references are associated with this feature.