Pseudomonas aeruginosa PA7, PSPA7_6206 (soxA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_6206
Name
soxA
Replicon chromosome
Genomic location 6410883 - 6413900 (+ strand)

Cross-References

RefSeq YP_001351517.1
GI 152985384
Entrez 5354341
INSDC ABR82567.1
NCBI Locus Tag PSPA7_6206
UniParc UPI0000D727B9
UniProtKB Acc A6VEN2
UniProtKB ID A6VEN2_PSEA7
UniRef100 UniRef100_A6VEN2
UniRef50 UniRef50_Q9HTE6
UniRef90 UniRef90_Q9HTE6

Product

Feature Type CDS
Coding Frame 1
Product Name
sarcosine oxidase subunit alpha
Synonyms
Evidence for Translation
Charge (pH 7) 6.00
Kyte-Doolittle Hydrophobicity Value -0.237
Molecular Weight (kDa) 109442.5
Isoelectric Point (pI) 7.69

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 499 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004972 (512 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_6206
Search term: soxA

Human Homologs

Ensembl 110, assembly GRCh38.p14
dimethylglycine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:24475]
E-value: 1.0e-32
Percent Identity: 27.3

References

No references are associated with this feature.