Pseudomonas aeruginosa PA7, PSPA7_6284

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_6284
Name
Replicon chromosome
Genomic location 6500735 - 6501514 (- strand)

Cross-References

RefSeq YP_001351595.1
GI 152986437
Entrez 5353525
INSDC ABR83620.1
NCBI Locus Tag PSPA7_6284
UniParc UPI0000D727FD
UniProtKB Acc A6VEW0
UniProtKB ID A6VEW0_PSEA7
UniRef100 UniRef100_A6VEW0
UniRef50 UniRef50_Q4KKJ3
UniRef90 UniRef90_W0Z228

Product

Feature Type CDS
Coding Frame 1
Product Name
putative lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) 1.88
Kyte-Doolittle Hydrophobicity Value -0.229
Molecular Weight (kDa) 28.9
Isoelectric Point (pI) 7.82

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4BJ4 HYDROLASE 04/16/13 Structure of Pseudomonas aeruginosa amidase Ampdh2 PSEUDOMONAS AERUGINOSA PAO1 1.722 X-RAY DIFFRACTION 97.9
4BPA HYDROLASE 05/23/13 Crystal structure of AmpDh2 from Pseudomonas aeruginosa in complex with NAG-NAM-NAG-NAM tetrasaccharide PSEUDOMONAS AERUGINOSA PAO1 2.7 X-RAY DIFFRACTION 96.5
4BOL HYDROLASE 05/21/13 Crystal structure of AmpDh2 from Pseudomonas aeruginosa in complex with pentapeptide PSEUDOMONAS AERUGINOSA PAO1 1.7 X-RAY DIFFRACTION 96.1

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 250 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005025 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_6284

Human Homologs

References

No references are associated with this feature.