Pseudomonas aeruginosa M18, PAM18_0095
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa M18
GCF_000226155.1|latest |
| Locus Tag |
PAM18_0095
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 111752 - 113044 (- strand) |
Cross-References
| RefSeq | YP_005972686.1 |
| GI | 386056164 |
| Entrez | 12564112 |
| NCBI Locus Tag | PAM18_0095 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
hypothetical protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 3.38 |
| Kyte-Doolittle Hydrophobicity Value | 0.060 |
| Molecular Weight (kDa) | 44.8 |
| Isoelectric Point (pI) | 8.61 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 4ZV0 | PROTEIN BINDING | 05/18/15 | Structure of Tse6 in complex with Tsi6 | Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) | 1.401 | X-RAY DIFFRACTION | 100.0 |
| 6OX6 | TRANSFERASE | 05/13/19 | Crystal structure of the complex between the Type VI effector Tas1 and its immunity protein | Pseudomonas aeruginosa | 2.17 | X-RAY DIFFRACTION | 98.4 |
| 4ZV4 | TRANSLATION | 05/18/15 | Structure of Tse6 in complex with EF-Tu | Pseudomonas aeruginosa; Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) | 3.504 | X-RAY DIFFRACTION | 100.0 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 25 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000092 (1670 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PAM18_0095
|
Human Homologs
References
No references are associated with this feature.