Pseudomonas aeruginosa M18, PAM18_4284 (opdH)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas aeruginosa M18
GCF_000226155.1|latest
Locus Tag
PAM18_4284
Name
opdH
Replicon chromosome
Genomic location 4731521 - 4732765 (+ strand)

Cross-References

RefSeq YP_005976867.1
GI 386060345
Entrez 12568345
NCBI Locus Tag PAM18_4284

Product

Feature Type CDS
Coding Frame 1
Product Name
cis-aconitate porin OpdH
Synonyms
Evidence for Translation
Charge (pH 7) 0.21
Kyte-Doolittle Hydrophobicity Value -0.452
Molecular Weight (kDa) 45663.7
Isoelectric Point (pI) 7.09

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3T20 MEMBRANE PROTEIN 07/22/11 Crystal structure of Pseudomonas aeruginosa OccK5 (OpdH) Pseudomonas aeruginosa 2.6 X-RAY DIFFRACTION 100.0
2Y0L TRANSPORT PROTEIN 12/03/10 Crystal Structure of Pseudomonas Aeruginosa OpdO PSEUDOMONAS AERUGINOSA 2.59 X-RAY DIFFRACTION 99.8

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 21 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000729 (839 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PAM18_4284
Search term: opdH

Human Homologs

References

No references are associated with this feature.