Pseudomonas aeruginosa M18, PAM18_5626

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas aeruginosa M18
GCF_000226155.1|latest
Locus Tag
PAM18_5626
Name
Replicon chromosome
Genomic location 6252024 - 6252806 (+ strand)

Cross-References

RefSeq YP_005978205.1
GI 386061683
Entrez 12569725
NCBI Locus Tag PAM18_5626

Product

Feature Type CDS
Coding Frame 1
Product Name
putative TonB-dependent receptor
Synonyms
Evidence for Translation
Charge (pH 7) 1.96
Kyte-Doolittle Hydrophobicity Value -0.102
Molecular Weight (kDa) 28.1
Isoelectric Point (pI) 8.69

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4K3F TRANSPORT PROTEIN 04/10/13 Crystal structure of a putative TonB-dependent receptor (PA5505) from Pseudomonas aeruginosa PAO1 at 1.60 A resolution Pseudomonas aeruginosa 1.6 X-RAY DIFFRACTION 99.6

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 268 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005044 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PAM18_5626

Human Homologs

References

No references are associated with this feature.