Pseudomonas aeruginosa DK2, PADK2_29265
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa DK2
GCF_000271365.1|latest |
| Locus Tag |
PADK2_29265
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 6334147 - 6334929 (+ strand) |
Cross-References
| RefSeq | YP_006485816.1 |
| GI | 392987229 |
| Entrez | 13176161 |
| NCBI Locus Tag | PADK2_29265 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
TonB-dependent receptor
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 1.96 |
| Kyte-Doolittle Hydrophobicity Value | -0.102 |
| Molecular Weight (kDa) | 28.1 |
| Isoelectric Point (pI) | 8.69 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 4K3F | TRANSPORT PROTEIN | 04/10/13 | Crystal structure of a putative TonB-dependent receptor (PA5505) from Pseudomonas aeruginosa PAO1 at 1.60 A resolution | Pseudomonas aeruginosa | 1.6 | X-RAY DIFFRACTION | 99.6 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 268 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG005044 (534 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PADK2_29265
Search term: TonB-dependent receptor
|
Human Homologs
References
No references are associated with this feature.