Pseudomonas aeruginosa RP73, M062_02580

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas aeruginosa RP73
GCF_000414035.1|latest
Locus Tag
M062_02580
Name
Replicon chromosome
Genomic location 568432 - 569610 (- strand)

Cross-References

RefSeq YP_008130980.1
GI 514408110
Entrez 15958259
NCBI Locus Tag M062_02580

Product

Feature Type CDS
Coding Frame 1
Product Name
protein nirF
Synonyms
Evidence for Translation
Charge (pH 7) -3.62
Kyte-Doolittle Hydrophobicity Value -0.264
Molecular Weight (kDa) 43.4
Isoelectric Point (pI) 6.36

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6TV9 UNKNOWN FUNCTION 01/09/20 Heme d1 biosynthesis associated Protein NirF in complex with dihydro-heme d1 Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) 1.893 X-RAY DIFFRACTION 99.7
6TV2 UNKNOWN FUNCTION 01/08/20 Heme d1 biosynthesis associated Protein NirF Pseudomonas aeruginosa PAO1 1.561 X-RAY DIFFRACTION 99.7

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 70 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000494 (709 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: M062_02580
Search term: protein nirF

Human Homologs

References

No references are associated with this feature.