Pseudomonas entomophila L48, PSEEN0025 (def)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas entomophila L48
GCF_000026105.1|latest
Locus Tag
PSEEN0025
Name
def
Replicon chromosome
Genomic location 26203 - 26709 (- strand)

Cross-References

RefSeq YP_605836.1
GI 104779338
EC Number 3.5.1.88
Entrez 4086478
INSDC CAK13019.1
UniParc UPI0000D77EB0
UniProtKB Acc Q1I2G5
UniProtKB ID Q1I2G5_PSEE4
UniRef100 UniRef100_Q1I2G5
UniRef50 UniRef50_Q9I7A8
UniRef90 UniRef90_Q88RR1

Product

Feature Type CDS
Coding Frame 1
Product Name
peptide deformylase
Synonyms
Evidence for Translation
Charge (pH 7) -5.86
Kyte-Doolittle Hydrophobicity Value -0.494
Molecular Weight (kDa) 19.4
Isoelectric Point (pI) 5.11

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 587 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000019 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEEN0025
Search term: def

Human Homologs

References

No references are associated with this feature.