Pseudomonas entomophila L48, PSEEN1901

Gene Feature Overview

Strain	Pseudomonas entomophila L48 GCF_000026105.1|latest
Locus Tag	PSEEN1901
Name
Replicon	chromosome
Genomic location	1990135 - 1990851 (+ strand)

Cross-References

RefSeq	YP_607544.1
GI	104781046
Entrez	4088575
INSDC	CAK14738.1
UniParc	UPI0000D7853D
UniProtKB Acc	Q1IC75
UniProtKB ID	Q1IC75_PSEE4
UniRef100	UniRef100_Q1IC75
UniRef50	UniRef50_C1DHB3
UniRef90	UniRef90_Q1IC75

Product

Feature Type	CDS
Coding Frame	1
Product Name	GntR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7)	-1.65
Kyte-Doolittle Hydrophobicity Value	-0.557
Molecular Weight (kDa)	27038.2
Isoelectric Point (pI)	6.68

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
7XP1	SIGNALING PROTEIN	05/02/22	Crystal structure of PmiR from Pseudomonas aeruginosa	Pseudomonas aeruginosa PAO1	2.5	X-RAY DIFFRACTION	90.6
7XP0	SIGNALING PROTEIN	05/02/22	Crystal structure of PmiR from Pseudomonas aeruginosa	Pseudomonas aeruginosa PAO1	2.61	X-RAY DIFFRACTION	90.6

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 400 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000770 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSEEN1901 Search term: GntR family transcriptional regulator

Human Homologs

References