Pseudomonas entomophila L48, PSEEN2020
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas entomophila L48
GCF_000026105.1|latest |
| Locus Tag |
PSEEN2020
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 2107602 - 2108450 (- strand) |
Cross-References
| RefSeq | YP_607657.1 |
| GI | 104781159 |
| EC Number | 1.1.1.25 |
| Entrez | 4088233 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
shikimate 5-dehydrogenase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -3.61 |
| Kyte-Doolittle Hydrophobicity Value | 0.144 |
| Molecular Weight (kDa) | 29832.9 |
| Isoelectric Point (pI) | 5.96 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 601 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000242 (485 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSEEN2020
Search term: shikimate 5-dehydrogenase
|
Human Homologs
References
No references are associated with this feature.