Pseudomonas entomophila L48, PSEEN4296 (algU)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas entomophila L48
GCF_000026105.1|latest
Locus Tag
PSEEN4296
Name
algU
Replicon chromosome
Genomic location 4581731 - 4582312 (- strand)

Cross-References

RefSeq YP_609767.1
GI 104783269
Entrez 4089479
INSDC CAK16983.1
UniParc UPI0000D78DE1
UniProtKB Acc Q1I5V2
UniProtKB ID Q1I5V2_PSEE4
UniRef100 UniRef100_Q1I5V2
UniRef50 UniRef50_D0ZSY9
UniRef90 UniRef90_Q06198

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA polymerase sigma factor AlgU
Synonyms
Evidence for Translation
Charge (pH 7) -5.83
Kyte-Doolittle Hydrophobicity Value -0.525
Molecular Weight (kDa) 22.3
Isoelectric Point (pI) 5.16

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 493 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000736 (532 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEEN4296
Search term: algU

Human Homologs

References

No references are associated with this feature.