Pseudomonas stutzeri A1501, PST_1231 (rnc)

Gene Feature Overview

Strain	Pseudomonas stutzeri A1501 GCF_000013785.1|latest
Locus Tag	PST_1231
Name	rnc
Replicon	chromosome
Genomic location	1338738 - 1339364 (+ strand)

Cross-References

RefSeq	YP_001171768.1
GI	146281615
EC Number	3.1.26.3
Entrez	5097317
INSDC	ABP78926.1
NCBI Locus Tag	PST_1231
UniParc	UPI00014FF2D7
UniProtKB Acc	A4VIX5
UniProtKB ID	A4VIX5_PSEU5
UniRef100	UniRef100_F2MX01
UniRef50	UniRef50_Q4KHT1
UniRef90	UniRef90_F2MX01

Product

Feature Type	CDS
Coding Frame	1
Product Name	ribonuclease III
Synonyms
Evidence for Translation
Charge (pH 7)	-2.65
Kyte-Doolittle Hydrophobicity Value	-0.136
Molecular Weight (kDa)	22919.8
Isoelectric Point (pI)	6.25

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 588 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000744 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PST_1231 Search term: rnc Search term: ribonuclease III

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000339845 drosha ribonuclease III [Source:HGNC Symbol;Acc:HGNC:17904] E-value: 8.3e-17 Percent Identity: 33.3
Ensembl 110, assembly GRCh38.p14	ENSP00000425979 drosha ribonuclease III [Source:HGNC Symbol;Acc:HGNC:17904] E-value: 8.3e-17 Percent Identity: 33.3
Ensembl 110, assembly GRCh38.p14	ENSP00000424161 drosha ribonuclease III [Source:HGNC Symbol;Acc:HGNC:17904] E-value: 8.3e-17 Percent Identity: 33.3

References