Pseudomonas stutzeri A1501, PST_3527 (nirF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas stutzeri A1501
GCF_000013785.1|latest
Locus Tag
PST_3527
Name
nirF
Replicon chromosome
Genomic location 3815224 - 3816399 (- strand)

Cross-References

RefSeq YP_001173997.1
GI 146283844
Entrez 5096488
INSDC ABP81155.1
NCBI Locus Tag PST_3527
UniParc UPI000068F26C
UniProtKB Acc A4VQA4
UniProtKB ID A4VQA4_PSEU5
UniRef100 UniRef100_Q2KJM9
UniRef50 UniRef50_Q51480
UniRef90 UniRef90_Q52521

Product

Feature Type CDS
Coding Frame 1
Product Name
heme d1 biosynthesis protein NirF
Synonyms
Evidence for Translation
Charge (pH 7) -2.86
Kyte-Doolittle Hydrophobicity Value -0.194
Molecular Weight (kDa) 43122.6
Isoelectric Point (pI) 6.43

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 71 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000494 (709 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PST_3527
Search term: nirF

Human Homologs

References

No references are associated with this feature.