Pseudomonas stutzeri A1501, PST_3538 (nirN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas stutzeri A1501
GCF_000013785.1|latest
Locus Tag
PST_3538
Name
nirN
Replicon chromosome
Genomic location 3824889 - 3826397 (+ strand)

Cross-References

RefSeq YP_001174008.1
GI 146283855
Entrez 5096499
INSDC ABP81166.1
NCBI Locus Tag PST_3538
UniParc UPI000068F275
UniProtKB Acc A4VQB5
UniProtKB ID A4VQB5_PSEU5
UniRef100 UniRef100_Q2KJP1
UniRef50 UniRef50_F8GTF5
UniRef90 UniRef90_F2N627

Product

Feature Type CDS
Coding Frame 1
Product Name
c-type cytochrome
Synonyms
Evidence for Translation
Charge (pH 7) -9.96
Kyte-Doolittle Hydrophobicity Value -0.182
Molecular Weight (kDa) 54911.6
Isoelectric Point (pI) 5.93

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 67 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000494 (709 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PST_3538
Search term: nirN
Search term: c-type cytochrome

Human Homologs

References

No references are associated with this feature.