Pseudomonas stutzeri A1501, PST_3945

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas stutzeri A1501
GCF_000013785.1|latest
Locus Tag
PST_3945
Name
Replicon chromosome
Genomic location 4277880 - 4278596 (+ strand)

Cross-References

RefSeq YP_001174410.1
GI 146284257
Entrez 5096906
INSDC ABP81568.1
NCBI Locus Tag PST_3945
UniParc UPI00014FF1CC
UniProtKB Acc A4VRG7
UniProtKB ID A4VRG7_PSEU5
UniRef100 UniRef100_A4VRG7
UniRef50 UniRef50_S6AC35
UniRef90 UniRef90_F8H451

Product

Feature Type CDS
Coding Frame 1
Product Name
16S ribosomal RNA methyltransferase RsmE
Synonyms
Evidence for Translation
Charge (pH 7) -3.40
Kyte-Doolittle Hydrophobicity Value -0.030
Molecular Weight (kDa) 25965.5
Isoelectric Point (pI) 6.16

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 543 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000410 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PST_3945

Human Homologs

References

No references are associated with this feature.