Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_1945 (oprF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri ATCC 17588 = LMG 11199 - Assembly GCF_000219605.1
GCF_000219605.1|latest
Locus Tag
PSTAB_1945
Name
oprF
Replicon chromosome
Genomic location 2057782 - 2058681 (+ strand)

Cross-References

RefSeq YP_004714315.1
GI 339494022
Entrez 10942988
INSDC AEJ05226.1
NCBI Locus Tag PSTAB_1945
UniParc UPI000215DC73
UniProtKB Acc F8HA16
UniProtKB ID F8HA16_PSEUT
UniRef100 UniRef100_F8HA16
UniRef50 UniRef50_A4VL65
UniRef90 UniRef90_A4VL65

Product

Feature Type CDS
Coding Frame 1
Product Name
Outer membrane protein OprF
Synonyms
Evidence for Translation
Charge (pH 7) -17.55
Kyte-Doolittle Hydrophobicity Value -0.575
Molecular Weight (kDa) 32555.4
Isoelectric Point (pI) 4.43

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 438 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003618 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSTAB_1945
Search term: oprF

Human Homologs

References

No references are associated with this feature.