Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_3501 (nirF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri ATCC 17588 = LMG 11199 - Assembly GCF_000219605.1
GCF_000219605.1|latest
Locus Tag
PSTAB_3501
Name
nirF
Replicon chromosome
Genomic location 3766594 - 3767769 (- strand)

Cross-References

RefSeq YP_004715871.1
GI 339495578
Entrez 10944544
INSDC AEJ06782.1
NCBI Locus Tag PSTAB_3501
UniParc UPI000215D92F
UniProtKB Acc F8H0E4
UniProtKB ID F8H0E4_PSEUT
UniRef100 UniRef100_F8H0E4
UniRef50 UniRef50_Q51480
UniRef90 UniRef90_F2N616

Product

Feature Type CDS
Coding Frame 1
Product Name
heme d1 biosynthesis protein NirF
Synonyms
Evidence for Translation
Charge (pH 7) -6.10
Kyte-Doolittle Hydrophobicity Value -0.165
Molecular Weight (kDa) 42869.3
Isoelectric Point (pI) 5.66

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 86 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000494 (709 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSTAB_3501
Search term: nirF

Human Homologs

References

No references are associated with this feature.