Pseudomonas stutzeri DSM 4166, PSTAA_1194 (rnc)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri DSM 4166
GCF_000195105.1|latest
Locus Tag
PSTAA_1194
Name
rnc
Replicon chromosome
Genomic location 1276709 - 1277398 (+ strand)

Cross-References

RefSeq YP_005937846.1
GI 386019822
Entrez 12528336
INSDC AEA83104.1
NCBI Locus Tag PSTAA_1194
UniParc UPI0002047280
UniProtKB Acc F2MX01
UniProtKB ID F2MX01_PSEU6
UniRef100 UniRef100_F2MX01
UniRef50 UniRef50_Q4KHT1
UniRef90 UniRef90_F2MX01

Product

Feature Type CDS
Coding Frame 1
Product Name
ribonuclease III
Synonyms
Evidence for Translation
Charge (pH 7) -1.65
Kyte-Doolittle Hydrophobicity Value -0.196
Molecular Weight (kDa) 25.4
Isoelectric Point (pI) 6.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 589 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000744 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSTAA_1194
Search term: rnc
Search term: ribonuclease III

Human Homologs

Ensembl 110, assembly GRCh38.p14
drosha ribonuclease III [Source:HGNC Symbol;Acc:HGNC:17904]
E-value: 1.8e-17
Percent Identity: 31.7
Ensembl 110, assembly GRCh38.p14
drosha ribonuclease III [Source:HGNC Symbol;Acc:HGNC:17904]
E-value: 1.8e-17
Percent Identity: 31.7
Ensembl 110, assembly GRCh38.p14
drosha ribonuclease III [Source:HGNC Symbol;Acc:HGNC:17904]
E-value: 1.8e-17
Percent Identity: 31.7

References

No references are associated with this feature.