Pseudomonas stutzeri DSM 4166, PSTAA_3624 (nirF)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas stutzeri DSM 4166
GCF_000195105.1|latest |
| Locus Tag |
PSTAA_3624
|
| Name |
nirF
|
| Replicon | chromosome |
| Genomic location | 3875649 - 3876824 (- strand) |
Cross-References
| RefSeq | YP_005940226.1 |
| GI | 386022201 |
| Entrez | 12530771 |
| NCBI Locus Tag | PSTAA_3624 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
heme d1 biosynthesis protein NirF
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -3.86 |
| Kyte-Doolittle Hydrophobicity Value | -0.171 |
| Molecular Weight (kDa) | 43.0 |
| Isoelectric Point (pI) | 6.25 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 71 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000494 (709 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSTAA_3624
Search term: nirF
Search term: heme d1 biosynthesis protein NirF
|
Human Homologs
References
No references are associated with this feature.