Strain |
Pseudomonas stutzeri DSM 10701
GCF_000279165.1|latest |
Locus Tag |
PSJM300_02905
|
Name |
rpsU
|
Replicon | chromosome |
Genomic location | 648992 - 649207 (- strand) |
RefSeq | YP_006523017.1 |
GI | 397685698 |
Entrez | 13327107 |
INSDC | AFN76659.1 |
NCBI Locus Tag | PSJM300_02905 |
UniParc | UPI00025493B2 |
UniProtKB Acc | I6ZX95 |
UniProtKB ID | I6ZX95_PSEST |
UniRef100 | UniRef100_W8R3J5 |
UniRef50 | UniRef50_B4RY34 |
UniRef90 | UniRef90_C1DIY4 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
30S ribosomal protein S21
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | 13.19 |
Kyte-Doolittle Hydrophobicity Value | -1.107 |
Molecular Weight (kDa) | 8.4 |
Isoelectric Point (pI) | 11.44 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
6SPE | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 30s ribosome from a clinical isolate | Pseudomonas aeruginosa | 3.6 | ELECTRON MICROSCOPY | 98.4 |
7UNR | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.9 | ELECTRON MICROSCOPY | 95.8 |
6SPG | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 70s ribosome from a clinical isolate | Pseudomonas aeruginosa | 3.34 | ELECTRON MICROSCOPY | 98.4 |
7UNV | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.7 | ELECTRON MICROSCOPY | 95.8 |
7UNU | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.9 | ELECTRON MICROSCOPY | 95.8 |
7UNW | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.6 | ELECTRON MICROSCOPY | 95.8 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 353 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000562 (493 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PSJM300_02905
Search term: rpsU
Search term: 30S ribosomal protein S21
|