Pseudomonas stutzeri DSM 10701, PSJM300_04805 (rnc)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri DSM 10701
GCF_000279165.1|latest
Locus Tag
PSJM300_04805
Name
rnc
Replicon chromosome
Genomic location 1057787 - 1058476 (+ strand)

Cross-References

RefSeq YP_006523395.1
GI 397686076
EC Number 3.1.26.3
Entrez 13325473
NCBI Locus Tag PSJM300_04805

Product

Feature Type CDS
Coding Frame 1
Product Name
ribonuclease III
Synonyms
Evidence for Translation
Charge (pH 7) -2.88
Kyte-Doolittle Hydrophobicity Value -0.179
Molecular Weight (kDa) 25434.7
Isoelectric Point (pI) 6.05

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 589 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000744 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSJM300_04805
Search term: rnc
Search term: ribonuclease III

Human Homologs

Ensembl 110, assembly GRCh38.p14
drosha ribonuclease III [Source:HGNC Symbol;Acc:HGNC:17904]
E-value: 3.3e-19
Percent Identity: 32.3
Ensembl 110, assembly GRCh38.p14
drosha ribonuclease III [Source:HGNC Symbol;Acc:HGNC:17904]
E-value: 3.3e-19
Percent Identity: 32.3
Ensembl 110, assembly GRCh38.p14
drosha ribonuclease III [Source:HGNC Symbol;Acc:HGNC:17904]
E-value: 3.3e-19
Percent Identity: 32.3

References

No references are associated with this feature.