Pseudomonas stutzeri RCH2, Psest_4218

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri RCH2
GCF_000327065.1|latest
Locus Tag
Psest_4218
Name
Replicon chromosome
Genomic location 4397058 - 4397576 (- strand)

Cross-References

RefSeq YP_007242318.1
GI 431929284
Entrez 14302065
INSDC AGA88688.1
NCBI Locus Tag Psest_4218
UniParc UPI000215D06F
UniProtKB Acc L0GPL1
UniProtKB ID L0GPL1_PSEST
UniRef100 UniRef100_A0A023WXT4
UniRef50 UniRef50_Q6TKV2
UniRef90 UniRef90_A0A078M7L1

Product

Feature Type CDS
Coding Frame 1
Product Name
type VI secretion system effector
Synonyms
Evidence for Translation
Charge (pH 7) -5.39
Kyte-Doolittle Hydrophobicity Value -0.487
Molecular Weight (kDa) 19.5
Isoelectric Point (pI) 5.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 70 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000260 (995 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psest_4218

Human Homologs

References

No references are associated with this feature.