Pseudomonas stutzeri RCH2, Psest_4246

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri RCH2
GCF_000327065.1|latest
Locus Tag
Psest_4246
Name
Replicon chromosome
Genomic location 4428515 - 4432054 (+ strand)

Cross-References

RefSeq YP_007242345.1
GI 431929311
Entrez 14302094
INSDC AGA88715.1
NCBI Locus Tag Psest_4246
UniParc UPI0002A192B7
UniProtKB Acc L0GTK4
UniProtKB ID L0GTK4_PSEST
UniRef100 UniRef100_L0GTK4
UniRef50 UniRef50_G8Q735
UniRef90 UniRef90_F2MV93

Product

Feature Type CDS
Coding Frame 1
Product Name
type VI secretion protein IcmF
Synonyms
Evidence for Translation
Charge (pH 7) 13.62
Kyte-Doolittle Hydrophobicity Value -0.303
Molecular Weight (kDa) 132429.9
Isoelectric Point (pI) 9.42

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 104 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000076 (865 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psest_4246

Human Homologs

References

No references are associated with this feature.