Pseudomonas mendocina NK-01, MDS_0040

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_0040
Name
Replicon chromosome
Genomic location 51896 - 52426 (- strand)

Cross-References

RefSeq YP_004377823.1
GI 330500954
Entrez 10454822
INSDC AEB56071.1
NCBI Locus Tag MDS_0040
UniParc UPI000206E976
UniProtKB Acc F4DV56
UniProtKB ID F4DV56_PSEMN
UniRef100 UniRef100_F4DV56
UniRef50 UniRef50_Q7WG29
UniRef90 UniRef90_W6QNW1

Product

Feature Type CDS
Coding Frame 1
Product Name
D,D-heptose 1,7-bisphosphate phosphatase
Synonyms
Evidence for Translation
Charge (pH 7) -3.17
Kyte-Doolittle Hydrophobicity Value 0.049
Molecular Weight (kDa) 18758.4
Isoelectric Point (pI) 5.61

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 361 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000006 (538 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_0040

Human Homologs

References

No references are associated with this feature.