Pseudomonas mendocina NK-01, MDS_0076

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_0076
Name
Replicon chromosome
Genomic location 89610 - 90167 (+ strand)

Cross-References

RefSeq YP_004377859.1
GI 330500990
Entrez 10454858
INSDC AEB56107.1
NCBI Locus Tag MDS_0076
UniParc UPI000206E9B2
UniProtKB Acc F4DV92
UniProtKB ID F4DV92_PSEMN
UniRef100 UniRef100_F4DV92
UniRef50 UniRef50_Q88RQ9
UniRef90 UniRef90_W6QWW4

Product

Feature Type CDS
Coding Frame 1
Product Name
SUA5/YciO/YrdC domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) -1.10
Kyte-Doolittle Hydrophobicity Value -0.362
Molecular Weight (kDa) 20646.3
Isoelectric Point (pI) 6.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 640 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000022 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_0076

Human Homologs

References

No references are associated with this feature.