Pseudomonas mendocina NK-01, MDS_0166

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_0166
Name
Replicon chromosome
Genomic location 177254 - 178153 (+ strand)

Cross-References

RefSeq YP_004377949.1
GI 330501080
Entrez 10454948
INSDC AEB56197.1
NCBI Locus Tag MDS_0166
UniParc UPI000206EA51
UniProtKB Acc F4DWV5
UniProtKB ID F4DWV5_PSEMN
UniRef100 UniRef100_F4DWV5
UniRef50 UniRef50_A4XNK8
UniRef90 UniRef90_A4XNK8

Product

Feature Type CDS
Coding Frame 1
Product Name
protoheme IX farnesyltransferase
Synonyms
Evidence for Translation
Charge (pH 7) 12.04
Kyte-Doolittle Hydrophobicity Value 0.739
Molecular Weight (kDa) 33.0
Isoelectric Point (pI) 9.96

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 472 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000111 (993 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_0166

Human Homologs

References

No references are associated with this feature.