Pseudomonas mendocina NK-01, MDS_1755

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_1755
Name
Replicon chromosome
Genomic location 1900990 - 1903614 (+ strand)

Cross-References

RefSeq YP_004379538.1
GI 330502669
Entrez 10456537
INSDC AEB57786.1
NCBI Locus Tag MDS_1755
UniParc UPI000206E1F7
UniProtKB Acc F4DLR8
UniProtKB ID F4DLR8_PSEMN
UniRef100 UniRef100_F4DLR8
UniRef50 UniRef50_A4XWE2
UniRef90 UniRef90_A4XWE2

Product

Feature Type CDS
Coding Frame 1
Product Name
alanyl-tRNA synthetase
Synonyms
Evidence for Translation
Charge (pH 7) -23.39
Kyte-Doolittle Hydrophobicity Value -0.184
Molecular Weight (kDa) 94276.7
Isoelectric Point (pI) 5.13

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 667 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000870 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_1755

Human Homologs

Ensembl 110, assembly GRCh38.p14
alanyl-tRNA synthetase 1 [Source:HGNC Symbol;Acc:HGNC:20]
E-value: 2.0e-136
Percent Identity: 37.3

References

No references are associated with this feature.