Pseudomonas mendocina NK-01, MDS_1804

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_1804
Name
Replicon chromosome
Genomic location 1982041 - 1984470 (- strand)

Cross-References

RefSeq YP_004379587.1
GI 330502718
Entrez 10456586
INSDC AEB57835.1
NCBI Locus Tag MDS_1804
UniParc UPI000206E38B
UniProtKB Acc F4DLW7
UniProtKB ID F4DLW7_PSEMN
UniRef100 UniRef100_F4DLW7
UniRef50 UniRef50_F4DLW7
UniRef90 UniRef90_F4DLW7

Product

Feature Type CDS
Coding Frame 1
Product Name
TonB-dependent siderophore receptor
Synonyms
Evidence for Translation
Charge (pH 7) -23.66
Kyte-Doolittle Hydrophobicity Value -0.470
Molecular Weight (kDa) 89219.9
Isoelectric Point (pI) 4.76

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 323 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000149 (2669 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_1804

Human Homologs

References

No references are associated with this feature.